GEISHA - A Chicken Embryo Gene Expression Database
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SOX21
SRY-box 21

Gene
Official SymbolSOX21
Official Full NameSRY-box 21
CGNC ID
also known astranscription factor SOX-21
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
Gallus-Browse
Sequence Information
Genomic
RNAXM_002196865
PolypeptideXP_002196901
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
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Gene Ontology
Molecular Function
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Links to other databases
Entrez Gene100229418
Ensembl GeneENSTGUG00000011206
KEGGtgu:100229418
GEISHA IdSOX21.Freeman.2012Data SourcePublication
Complete cDNA Template Probeshow
CCCCGACTACAAGTACCGGCCGCGCCGCAAGCCCAAGACGCTGCTCAAGAAGGACAAGTTCGCCTTCCCCGTGCCCTAC
GGGCTGGGCGCCGTGGCCGAGCACGAGCCCCCGCACGGGCTGAAGGCGGCGGCGCTGCACGGCGGGGCTGCGGGCGGGC
TGGGGCCCGACTCGCTGCTGGGCAACCCCGAGAAGGCGGCCGCCGCCGCCGCCGCCGCCGCCGCGCGCGTCTTCTTCCC
GCAGTCGGCCGCCGCCGCGGCCGCCGCCGCCGCCGCCGCCGCCGCGGGCGGCCCCTACTCGCTGCTGGACCTGGGCTCC
AAGATGGCCGAGATCTCCTCGTCGTCGTCGGCGGGCTCGGCGCTGCCCTACGCCTCCTCGCTGGGCTACCCCGGCGCCG
GCGGGGCGGGAGCCTTCCACGGGGCCGCCGCCGCCGCCGCCGCCGCGGCCGCCGCCGCCGGGGGGCACACGCACTCGCA
CCCGTCCCCCGGCAACCCGGGCTACATGATCCCCTGCAACTGCAGCGCCTGGCCCGGGCCCGGGCTGCAGCCTCCGCTG
GCCTACATCCTCCTGCCGGGCATGGGCAAGCCCCAGCTGGACCCGTACCCCGCGGCCTACGCCGCCGCGCTATGACCCG
CGCTGTGAGCCGCTGCCCCGGAGGGGGAGCGGGCGGGGAGCGGCGGGGCCGCCGCCGACCTGTTGCGCGCCGCCCCGCC
TCGAGCT
CitationFreeman SD, Daudet N. Artificial induction of Sox21 regulates sensory cell formation in the embryonic chicken inner ear. PLoS One. 2012;7(10)
CommentsThe sequence below was obtained from NCBI (acc # AB026623.1 - Showing 718 bp region from base 1208 to 1925) using the information provided in the publication as described in Freeman et al.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
13-18
stage 18
stage 18
Ear/Otic Placode
ov: otic vesicle
25-30
stage 26
Ear/Otic Placode
pc: posterior cristae
sc: superior cristae
31-41
stage 31
stage 31
stage 31
stage 31
stage 41
stage 41
stage 41
stage 41
Ear/Otic Placode
HC, hair cell layer
SC, support cell layer
bp, basilar papilla
bp: basilar papilla
lc, lateral crista
lc: lateral crista
pc, posterior crista
pc: posterior crista
sc, superior crista
ut: utricle

Mouse

Emage
Eurexpress
MGI GXD

Frog

Xenbase

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFIN
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