GEISHA - A Chicken Embryo Gene Expression Database
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PPFIBP1
PPFIA binding protein 1

Gene
Official SymbolPPFIBP1
Official Full NamePPFIA binding protein 1
CGNC ID50704
also known asliprin-beta-1, liprin-beta-1|PTPRF interacting protein, binding protein 1 (liprin beta 1), liprin beta 1, PPFIBP1
gene typeprotein-coding
Genomic Map
 Ensembl
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_001030771
PolypeptideNP_001025942
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.4727
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly39524FBgn0036376
Human8496ENSG00000110841MIM:603141
Mouse67533ENSMUSG00000016487All phenotypic alleles (1):Targeted, other(1) MGI:1914783
Xenopus100493576, 3985251014145
Zebrafish100329686, 561961ENSDARG00000020236ZDB-GENE-060503-47ZFIN:ZDB-GENE-060503-47
Gene Ontology
Molecular FunctionBMP binding, cytokine activity, morphogen activity, protein homodimerization activity
Biological Processanterior/posterior axis specification, bone mineralization, cell migration involved in gastrulation, more...determination of dorsal identity, determination of left/right asymmetry in lateral mesoderm, growth plate cartilage chondrocyte proliferation, heart looping, mesendoderm development, negative regulation of cell proliferation, negative regulation of mesoderm development, negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry, nervous system development, sequestering of BMP in extracellular matrix, signal transduction involved in regulation of gene expression, ureteric bud development
Cellular Componentextracellular space
Links to other databases
Entrez Gene418219
Ensembl GeneENSGALG00000014106
KEGGgga:418219
GEISHA IdA10Data SourceGEISHA ISH Analysis
Forward cDNA Template Probeshow
GCATCATTTTACCTTCTTAGAGCATCATTATTTTTCCTTGAAGGTCATCAAATGTTAAAAGCATTAACTAGCCAATGGA
AGTTTTTTTGTCAGGCTTTCTGTCTTGCGAGGTGTCCTAGCCAAAAGCAAACAAAAAGTACTGTTAATTACAGCAGTCT
TTTATACAGTGTTGAGCATTGCATGTATTTTAGCACAATGGCATGAAGCTTCTTTGCTTTGTAACAAGAAAAAAAAAAG
CCCAGCTGCTCCTTGTGGATACTGTTTGGCTTTTACAAGAGCTTGTTGCTCGTTTCATCACTGCCCGTGCTGGAAGTGA
GACCATTGCTGACACACTGATGTGTGGTTTAATGGATCATGGATTTGTGCTGGTCCTGTGGGTAGGAAAGGAAGGAAGG
GGATTCCATGGACCTTGCAGCAGGTGTTGGGGGTAGACCAGAGATGTGTTCTAGCACTCTGCTGCTATAGCCTTACGAG
CTGTTACCAGTCAGGTTGGTTTTTTTGTTGGTTGGTTTTTTTGTTGTTGTTGTTTTCTTTTGAAAGGTATGCAGTTTGG
GCTAATTTTCATGTGCAAAGATGAAAACTGTGATGTGGACCAGTTGTGTTATATACAATATCAAGTGCTGCCATACTCT
CTTCAGTAGCTGGAGCCAGGCAAATGAGCCACGTTGTATTCGTGAAACAGTTTGTGCCACTTCCCATTTTTCTACAGAC
AGATCACACCTGGTGCTTTATTCAGAACTCTGACTGAGGAGCACCCACAAGTAATTTGCTGTCTGTTGTTTCTTCTTCT
GCAGTTCTGGGGGTGGCTGAGCTATTCCGACCAGGCAAAACCACCCCGTTCTGTAACGCCTGCTTGCCACTGT
Reverse cDNA Template Probeshow
TTGTTCCCGCGGAATAGGGAGAATTTTCTAGGACTTTTCCGGGGCAATTAACATTCCACAAGGTTTTTGGGTGTTTTTT
GGGTGTTAGCGGGGCGAAATATTTAATTCGCTTTTTTATCTGGGTGCACTGCGTTTTTCACAGGCAAGAGTTTTTTTTT
AAAGAAAAAAAAGCCGGCGGGTCCCTGGGAAACTTTGGTTTAAAAGGGTTGTTTTGTTTCTCTGCCCGGGGGGGGAAGG
AAACCATGGGACACAGAAAGGTGGTTAAAGGATCAAGAATGGTGGCTGGTCCTGGGTAGAAAAGAAGAAAGGGATTTCT
TGCCCTTGCACCAGGGTTTTGGGGTAAGCCCAAAAAGTGTTTAGCCTTTTGGTTGTTAAGCTTTAGGCGAGTTGTTACC
AGTCAGGTTGGTTTTTTTTGTGGGTGGGTTTTTTGTGGGGGTGGTGTTTTTTTTGAAAAGGTATGCAGTTTGGGATAAT
TTTCATGGGCAGGAAGATGAAAATTTTGATGTGGACCAGTTGTGTTATATACAATTTCAAGTGGGCTGCCATACTTTTT
TCAGTAGCTGGAGCCAGGCAAATGAGCCACGTTGTAGGTTCGTGAAACAGTTTGTGCCACTTCCCATTTTTCTACAGAC
AGATCACACGGCTGGTGCTTTATTCAGAATTCTGACTGAGGAGCACCCACAAGTAATTGGCGGTGTCGGTTGTTTCTTC
TTCGGCAGTTCTGGGGGTGGCTGAGTTATTCCGAGGCCAGGCAGAACCACCCCGTTCTGTAACGCCTGCTTGCCACTGT
CAGGTACGGAAATCCTCGTGGTGTGGGTTCAGGGCTTGCTTTCTGTGAATGTTCTGCAAGGTGGTGGGTTCAAAACCCC
GTTTTGCCACACGCAGCAGAGGCACCGGAAGAGGCATTGTGCAGGTTTTTGAGCAGAAGTATTCCTTCAGATTTTCCTG
AGCAGGGATACTGGTTAGTGGGCACAGTGAATGAATATTCACAGGAACAAAGGGGCTGGAGTGACACAGTGTTATGTGC
TGAAACAGGTACAAGCAAAGGTTCAGATTTGGTTTCTCATTTTGCTGCTGTTAACAAGCCTATCAGCAGCAGCAGATGA
TCAGGTTTTTTTTTAAGTCCGGTGTAAGTAAAGTTTTATTCCAAACACCCTGTTTGGTTGGGTTTCTTGGTTGGAGAGC
AGGTTGTCATTCAGAGCTGCCTTTCAGTGGTGAACCATGGTGGTTTTGCGGGGGGCTGTTAGGAAAGCATTGGTAACAG
TGGGGGAGATTTATGCGTGCATGTGCACAAAGCTGATACCATTGTGGTATTTTGGGTGTTTTTGAAGAGGGCAACGTAA
TTACTGTGTATTGCCATGTAAAATCCGGAATAAAAATCTGTGGAAAATGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
GAAAAAAACTCGAGGGGGGGCCCGGTACCCAATCGCCCTTAGTTACTTT
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
7-12
stage 10
Somites
caudal
13-17
stage 16
stage 17
Somites
caudal
overstained
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.4727

Mouse

EmageMGI:1914783
EurexpressMGI:1914783
MGI GXDMGI:1914783

Frog

Xenbase1014145

Fruit Fly

BDGPFBgn0036376

Zebra Finch

ZEBrAPPFIBP1

Zebrafish

ZFINZDB-GENE-060503-47
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