GEISHA - A Chicken Embryo Gene Expression Database
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FGF9
fibroblast growth factor 9

The human orthologue of this gene is associated
with the following human disease:
Gene
Official SymbolFGF9
Official Full Namefibroblast growth factor 9
CGNC ID49145
also known asfibroblast growth factor 9|fibroblast growth factor 9 (glia-activating factor)|glia-activating factor
gene typeprotein-coding
Genomic Map
 Ensembl ID not known
NCBI
UCSC
Gallus-Browse
Sequence Information
Genomic
RNANM_204399
PolypeptideNP_989730
Sequence Clusters/ESTsUnigene
Gene Expression
In Situ HybridizationGEISHA
EST ProfileGga.8489
Orthology
Entrez GeneEnsembl GeneGenetic PhenotypesMOD
Fruit Fly
Human2254ENSG00000102678MIM:612961MIM:600921
Mouse14180All phenotypic alleles (7):Spontaneous(1) Targeted, knock-out(2) Targeted, other(4) MGI:104723
Xenopus100217327, 378562484465
ZebrafishZDB-GENE-070424-238ZFIN:ZDB-GENE-070424-238
Gene Ontology
Molecular Function
Biological Process
Cellular Component
Links to other databases
Entrez Gene378917
Ensembl Gene
KEGGgga:378917

Entry 1

GEISHA IdFGF9.UApcrData SourceGEISHA ISH Analysis
Forward cDNA Template PrimerTTATAAAAGCTTGCGGCCGCAGAATATGGTCAGCATCCGAGGAGTAGACAG
Reverse cDNA Template PrimerGCTCTAGAAATTAACCCTCACTAAAGGGCTAATCAATAAGAACCCACCGCcDNA Template Length394
Complete cDNA Template Probeshow
GGGCCTGGTCAGCATCCGAGGAGTAGACAGCGGACTCTACCTTGGAATGAATGAGAAAGGGGAGCTCTACGGCTCGGAA
AAATTAACCCAGGAGTGTGTATTCAGAGAGCAGTTTGAAGAAAACTGGTATAACACATATTCATCAAATCTATATAAAC
ACGTGGACACTGGAAGACGATACTACGTGGCGTTAAATAAAGATGGAACTCCAAGAGAAGGGACTAGGACTAAACGGCA
TCAAAAATTTACACATTTTTTACCTAGACCAGTGGACCCTGAGAAAGTACCTGAACTATATAAGGATATTTTAAGCCAA
AGTTGACAAAGACAATTCCTTCACTTGAGCCCTTAAAAAGTAACCACTATAAAGGTTTCATGCGGTGGGTTCTTATTGA
TTAGCTGTGT
CommentsNo specific expression detected prior to stage 12.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
4-6
stage 5
Unlabeled
 
7-12
stage 7
stage 9
stage 12
Anterior Neuropore
Oral Pharynx
Unlabeled
Staining observed in neural tube may be due to trapping.
13-18
stage 13
stage 17
Forebrain
Leg AER
Oral Pharynx
Wing AER
 
19-24
stage 20
stage 21
Leg AER
Wing AER
 
25
stage 25
stage 25
Eye
Leg AER
Lung
Nasal Placode/Nerve
Pharyngeal Arches and Clefts
Somites
Spinal Ganglia and Nerves
Wing AER
 

Entry 2

GEISHA IdFGF9.Yoshioka.2005Data SourcePublication
Complete cDNA Template Probeshow
ATGGCTCCTCTCGGGGAGGTTGGGAACTATTTCGGTGTGCAGGACGCGGTGCCCTTTGGGAACGTGCCCGCGCTGCCGG
CGGACAGCCCGGTTTTGCTCAGTGACCACCTGGGCCAGGCTGAGGCAGGTGGGCTGCCCAGGGGCCCCGCGGTCACGGA
CTTGGACCATTTAAAGGGGATCCTCAGGAGGAGGCAGCTCTACTGCAGGACTGGATTTCATTTAGAAATCTTCCCCAAT
GGTACTATCCAGGGCACCAGGCAAGACCACAGCCGATTCGGTATACTGGAGTTCATCAGTATAGCAGTGGGCCTGGTCA
GCATCCGAGGAGTAGACAGCGGACTCTACCTTGGAATGAATGAGAAAGGGGAGCTCTACGGCTCGGAAAAATTAACCCA
GGAGTGTGTATTCAGAGAGCAGTTTGAAGAAAACTGGTATAACACATATTCATCAAATCTATATAAACACGTGGACACT
GGAAGACGATACTACGTGGCGTTAAATAAAGATGGAACTCCAAGAGAAGGGACTAGGACTAAACGGCATCAAAAATTTA
CACATTTTTTACCTAGACCAGTGGACCCTGAGAAAGTACCTGAACTATATAAGGATATTTTAAGCCAAAGTTGACAAAG
ACAATTCCTTCACTTGAGCCCTTAAAAAGTAACCACTATAAAGGTTTCATGCGGTGGGTTCTTATTGATTAGCTGTGTC
ATCACATCAGCTCCACTGTTGCCAAACTTTGTCGCATGCATAATGTATGATGGAGGCTTGGATGGAACATGCTGATTTT
GTTCTGCACTTAAAGGTTTGTCCTCCTGG
CitationYoshioka H, Ishimaru Y, Sugiyama N, Tsunekawa N, Noce T, Kasahara M, Morohashi K (2005). Mesonephric FGF signaling is associated with the development of sexually indifferent gonadal primordium in chick embryos. Dev Biol. 2005 Apr 1;280(1):150-61.
CopyrightCopyright © 2005 Elsevier Inc. All rights reserved.
CommentsInsufficient information provided in publication to verify exact sequence used to synthesize probe. Sequence below was obtained from NCBI (AB108842). Accession given in paper.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-24
stage 21
stage 21
stage 21
stage 21
Gonad
Trunk Mesenchyme
Comma-shaped Body
Gonadal Primordium
Mesonephric Mesenchyme
Nephrogenous Mesenchyme
25-30
stage 30
stage 30
Gonad
Female chick embryos
Male chick embryo
Mesonephros

Entry 3

GEISHA IdFGF9.Havens.2006Data SourcePublication
Complete cDNA Template Probeshow
ATGGCTCCTCTCGGGGAGGTTGGGAACTATTTCGGTGTGCAGGACGCGGTGCCCTTTGGGAACGTGCCCGCGCTGCCGG
CGGACAGCCCGGTTTTGCTCAGTGACCACCTGGGCCAGGCTGAGGCAGGTGGGCTGCCCAGGGGCCCCGCGGTCACGGA
CTTGGACCATTTAAAGGGGATCCTCAGGAGGAGGCAGCTCTACTGCAGGACTGGATTTCATTTAGAAATCTTCCCCAAT
GGTACTATCCAGGGCACCAGGCAAGACCACAGCCGATTCGGTATACTGGAGTTCATCAGTATAGCAGTGGGCCTGGTCA
GCATCCGAGGAGTAGACAGCGGACTCTACCTTGGAATGAATGAGAAAGGGGAGCTCTACGGCTCGGAAAAATTAACCCA
GGAGTGTGTATTCAGAGAGCAGTTTGAAGAAAACTGGTATAACACATATTCATCAAATCTATATAAACACGTGGACACT
GGAAGACGATACTACGTGGCGTTAAATAAAGATGGAACTCCAAGAGAAGGGACTAGGACTAAACGGCATCAAAAATTTA
CACATTTTTTACCTAGACCAGTGGACCCTGAGAAAGTACCTGAACTATATAAGGATATTTTAAGCCAAAGTTGACAAAG
ACAATTCCTTCACTTGAGCCCTTAAAAAGTAACCACTATAAAGGTTTCATGCGGTGGGTTCTTATTGATTAGCTGTGTC
ATCACATCAGCTCCACTGTTGCCAAACTTTGTCGCATGCATAATGTATGATGGAGGCTTGGATGGAACATGCTGATTTT
GTTCTGCACTTAAAGGTTTGTCCTCCTGG
CitationHavens BA, Rodgers B, Mina M. Tissue-specific expression of Fgfr2b and Fgfr2c isoforms, Fgf10 and Fgf9 in the developing chick mandible. Arch Oral Biol. 2006 Feb;51(2):134-45. Epub 2005 Aug 18.
CopyrightCopyright © 2005 Elsevier Ltd. All rights reserved.
CommentsThe complete cDNA template sequence was obtained from the information provided in the publication as described in Havens et al. 2006.
StageImage (click image to view full size)Location (click to highlight)Comments (click to highlight)
19-23
stage 21
stage 21
stage 22
stage 23
Head Mesenchyme
Limb Buds
Nasal Placode/Nerve
mandibular epithelium
 Data from NCBI Unigene EST Profile
Unigene ID: Gga.8489

Mouse

EmageMGI:104723
EurexpressMGI:104723
MGI GXDMGI:104723

Frog

Xenbase484465

Fruit Fly

BDGP

Zebra Finch

ZEBrA

Zebrafish

ZFINZDB-GENE-070424-238
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